PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM80547.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 248aa    MW: 26389.2 Da    PI: 4.8787
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM80547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.3e-192775355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a++ a+++++g
  OWM80547.1 27 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDLAARSMRG 75
                56******.**********965...5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MNPSPSKGKK TKQSSSSGQS PESSGRFLGV RRRPWGRYAA EIRDPSTKER HWLGTFDTAE  60
EAALAYDLAA RSMRGPHART NFVYSDSPAG SSVTSILSPD EAPHYHNASN NDSSGLSSIY  120
STVTPDPDPH QFQGGFAENV WPADKGSSSY ELPPFPSDMS EYSGNAGSGW GHNAEQGTWG  180
NTGSLACYHD PSSGFSDSTA GFDSGSGGSY FGFESSGEYV HSPLFSQMPP VSDSGPDGFN  240
LGSSSYFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-40ERF family protein