PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM80646.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 247aa    MW: 25792.9 Da    PI: 9.0865
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM80646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.1e-0586108123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++Cp Cgk F++   L  H  +H
  OWM80646.1  86 FSCPVCGKAFPSYQALGGHKASH 108
                 89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MALEALNSPT AAAAPFPFMD EAASARLAEP WAKRKRSKRP HPLTSPTEEE YLALCLVMLA  60
RGGRPSAAPL PPPPALEAAA AAKPSFSCPV CGKAFPSYQA LGGHKASHRV KPSASAGDDQ  120
STSTSAAAAA ATSLSSGKTH ECSICHRSFP SGQALGGHKR CHYEGGSNNS AAATASTASE  180
GTGSTRTHSH SHSQSHSHSR HNFDLNMPAL PELSPKFLVS PGDEEVESPH PSKKPRLTLN  240
IPIKREV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.16e-39C2H2 family protein