PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80708.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WOX

Protein Properties

Length: 245aa MW: 27434.8 Da PI: 9.7078

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.2	2.2e-21	94	153	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ OWM80708.1 94 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITAQLrkygKIEGKNVFYWFQNHKARERQ 153 7***************99************************************97 PP
2	Wus_type_Homeobox	119.1	2e-38	94	155	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L++yGkie+kNVfyWFQN+kaRerqkq OWM80708.1 94 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLRKYGKIEGKNVFYWFQNHKARERQKQ 155 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MKVHQLARGL WAAASPEHEP SGLSLAAAAS CKRLRPLAPK LSSPESSPAS TVSSAFDLKS 60 FIRPESGPRK LGSSSPDNDV KRDSPPVETH PGGTRWNPTQ EQIGILEMLY RGGMRTPNAQ 120 QIEQITAQLR KYGKIEGKNV FYWFQNHKAR ERQKQKRNNL GLGHCSRTPT SPTTVITTIT 180 LSTTTSREES EVIRDEDSPY KRKCRSWAFE FLEEDQSKLL SCRDHQAGVG EDRTLELFPL 240 HPEGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	1e-67	WOX family protein