PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80716.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 360aa MW: 40725.7 Da PI: 9.0965

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80716.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	106.4	2.2e-33	26	115	5	103
HHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 5 klyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkk 101 +y++++d+++++++sw +++++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F+kg+k+ll++i+r+k OWM80716.1 26 TTYQLVDDPATDHIVSWGDDETTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFRKGEKHLLCEIHRRK 113 58***********************************************************99.........********************9 PP XX CS HSF_DNA-bind 102 se 103 + OWM80716.1 114 AA 115 75 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MNAHRRKKNK NEDKGEKKKK KKGEETTYQL VDDPATDHIV SWGDDETTFV VWRPPEFARD 60 LLPNYFKHNN FSSFVRQLNT YGFRKIVPDR WEFANEFFRK GEKHLLCEIH RRKAAQPQVA 120 LNHHHHPPHS PLGLNPGPPA FFPFPAARVS LSPNSDSDND QPAWPCDSPP PQVSSPRYGA 180 GAAGAGFSTT TTSPSSVTAL SEDNERLRRS NNMLISELAH MRKLYNEIIY FVQNHVKPVP 240 PPSPANSVVF LNTSHLPNSK PLNSNPHYGI GGPYHHHQHH PYANPNCTKV QSPQSCVTIL 300 EEDEEEPNNA NVTKTKLFGV PLQSKKRLHP DRSNFEAHKT RLTVMEKDDL GLNLMPPSTC

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MNAHRRKKNK NEDKGEKKKK KKGEETTYQL VDDPATDHIV SWGDDETTFV VWRPPEFARD  60
LLPNYFKHNN FSSFVRQLNT YGFRKIVPDR WEFANEFFRK GEKHLLCEIH RRKAAQPQVA  120
LNHHHHPPHS PLGLNPGPPA FFPFPAARVS LSPNSDSDND QPAWPCDSPP PQVSSPRYGA  180
GAAGAGFSTT TTSPSSVTAL SEDNERLRRS NNMLISELAH MRKLYNEIIY FVQNHVKPVP  240
PPSPANSVVF LNTSHLPNSK PLNSNPHYGI GGPYHHHQHH PYANPNCTKV QSPQSCVTIL  300
EEDEEEPNNA NVTKTKLFGV PLQSKKRLHP DRSNFEAHKT RLTVMEKDDL GLNLMPPSTC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	5	22	RRKKNKNEDKGEKKKKKK
2	6	23	RRKKNKNEDKGEKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	9e-85	HSF family protein