PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80753.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 282aa MW: 30549.5 Da PI: 6.9347

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.2	4.3e-19	55	100	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v+++G+++W++I+r++ gR++k+c++rw + OWM80753.1 55 KGPWSAEEDRILTQLVQRYGPRNWSLISRHIS-GRSGKSCRLRWCNQ 100 79****************************.*********985 PP
2	Myb_DNA-binding	54.7	2.3e-17	109	151	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ OWM80753.1 109 PFSPAEDEAILAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 151 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MELAMNNNNN NMCSTSATSY SSDSSSSSES TYTCYGPAAV MGRSSFSGHR SDRVKGPWSA 60 EEDRILTQLV QRYGPRNWSL ISRHISGRSG KSCRLRWCNQ LSPSVEHRPF SPAEDEAILA 120 AHARYGNRWA TIARLLPGRT DNAVKNHWNS TLKRRASYYS PSPSAAPSAS ASAAAAVLGC 180 NSGNNNATDE ANGAAVHQYH YAQCDAGTSL TTTMEEGDDP LTALTLGRPG FGTGTEEEER 240 RGPVAAAEEV PEGFWNVMRG VIAREVREYM NSTLDAQTSG FH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	6e-58	MYB family protein