PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80889.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

SRS

Protein Properties

Length: 333aa MW: 35588.2 Da PI: 7.9735

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	221.2	2.1e-68	117	266	4	154
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...aeaaskrkrelkskkqsalsstklssaeskke 99 g+++CqdCGnqakkdC+h+RCRtCCk+rgf+C+thvkstWvpaakrrerqqqlaaa++++++ + +++kr+re+ +++q+++ +t+ s + OWM80889.1 117 GGINCQDCGNQAKKDCTHMRCRTCCKNRGFQCQTHVKSTWVPAAKRRERQQQLAAAMQQQQQPQqfrLIEHPKRQREDPNHHQTQQLATRPS----SGL 211 789*************************************************99998888773434455555555533444443333333....333 PP DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++P+evss+a+frc+rvs+++d++ee+aYqt+v+i+GhvfkGiLyd+G+e+ OWM80889.1 212 EVRQQFPPEVSSPALFRCMRVSGMEDADEEFAYQTSVNIAGHVFKGILYDHGPES 266 45667**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MAGWFYLGSA RDHLSKAEEE AAEEQGGGGD HRAAIYGANT TGNKGFELWP QFFPSFGVGL 60 NINGGGGGNN SHNNSNNSGS SASGVRRAAT GLIDFSDECW RSSTTSGGMR QGGLGGGGIN 120 CQDCGNQAKK DCTHMRCRTC CKNRGFQCQT HVKSTWVPAA KRRERQQQLA AAMQQQQQPQ 180 QFRLIEHPKR QREDPNHHQT QQLATRPSSG LEVRQQFPPE VSSPALFRCM RVSGMEDADE 240 EFAYQTSVNI AGHVFKGILY DHGPESRYTG VGGGEGSSGG GGAQQYLMAG STAATTSAAA 300 ATGSNPTMID PSLYPAPPYA LMAGTQFFQP PRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	1e-54	SRS family protein