PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80893.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

DBB

Protein Properties

Length: 291aa MW: 31778 Da PI: 5.9572

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80893.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.1	6.7e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++k + fC ++ lC C + H+ H OWM80893.1 4 QCDVCSKKAAVVFCAADEAALCSGCDHHVHHAnklafrHP 43 7****************************74446666665 PP
2	zf-B_box	28.9	2.3e-09	61	98	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 +++C+ ++e ++ lfC++++ lC+dC + +H + Ht OWM80893.1 61 APVCDICQERRAVLFCQQDRAVLCKDCDVPIHTSndHT 98 589*****************************666765 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MKIQCDVCSK KAAVVFCAAD EAALCSGCDH HVHHANKLAF RHPRLSLLEP PANCSEQAPH 60 APVCDICQER RAVLFCQQDR AVLCKDCDVP IHTSNDHTQN HSRYLLTRVK LSTSAPPLLF 120 TDHLKPEDMI PKPAPISEAI SSPMSSNMDG VNCDHWAGER GGGGGSSLGS GSLLRGVLTM 180 EMLHGAWHFE DMVDSCSESV ASFSFTKNDD GFTLSPDTEL ENHPMHPPFP ESMRMRAPDA 240 PAFELQYPTQ LSLPLGTQAV PFKETSPNQK KGDGFTVPLV ISPFCQDPTF L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	8e-44	DBB family protein