PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80977.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 313aa MW: 34655.7 Da PI: 5.4295

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.7	4.9e-14	120	171	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ +s++ + a+i A++++k+L+ OWM80977.1 120 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YSQRGDQASIIGGAINFVKELE 171 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MALEAVVYPQ QDPFIYCPNY AANTFLRPEY GAYNPFGLVL DQEEADPCDD KGAIYGNNNS 60 GAGSNCWDVH PNTSSPDTVV GAADAVVGRY QEQQPAAAGS GRRKRRRVKS TKNREEIENQ 120 RMTHIAVERN RRKQMNEYLA VLRSLMPPSY SQRGDQASII GGAINFVKEL EQLLQSMEAQ 180 KITNDSHNNN NLIAPQQPFS DFFSFPQYST RAAAGEAGAT TDVAADIEVT MVESHANLKI 240 QSRRRPKQLL RLVAGLQALR LSVLHLNVTS SDEMVLYSVS VKVEEGSHLT TVDEIAAAVN 300 QMFQRIEEEA AFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	107	RKRRR
2	104	108	KRRRV
3	121	132	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	8e-81	bHLH family protein