PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81066.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 321aa MW: 36062.9 Da PI: 5.8996

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.9e-17	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed +l+ +++q+G ++W++ ++ g+ R++k+c++rw +yl OWM81066.1 16 RGPWSPSEDSRLISYIQQHGHDNWRALPKLAGLSRCGKSCRLRWINYL 63 89********************************************97 PP
2	Myb_DNA-binding	29.8	1.4e-09	69	109	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E+e +++++ +W++Ia++++ gRt++++k+ w++yl OWM81066.1 69 RGNFTRKEEETIIRLH------QWSKIASHLP-GRTDNEIKNVWNTYL 109 6777777888777776......4*******.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MGKGRAPCCD KSQVKRGPWS PSEDSRLISY IQQHGHDNWR ALPKLAGLSR CGKSCRLRWI 60 NYLRPDVKRG NFTRKEEETI IRLHQWSKIA SHLPGRTDNE IKNVWNTYLK KRLPAFNGYA 120 DSTGDESKRD SSLTSTSSTH SSPSSFATHG AGGDRDMEID PGNKEVQIKD MLDRTGQNKP 180 SSSASHGSNA SNISCEVGDA EKDGKEKLDL FFDIMEEVNK PDIVTGNNAL LDIPFEYDTD 240 FWTMLDSLAR SPPQATEIDQ LLTANAYRDS TLGDQGINRE TENDKWLQYL EHELGLVEPW 300 PPVVQGEDDS KRPKDASRPL N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	2e-71	MYB family protein