PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81078.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 550aa    MW: 60829.2 Da    PI: 4.7658
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81078.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3497.5e-1071505351374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn............sseelaalklfse 86 
                 lv+lLl+cAeav  +d++la+++La++   +s+ gd++qR+  +f+ +L++rl+  ++++ y   +   t++ +             +e++ a++l+++
  OWM81078.1 150 LVHLLLACAEAVGCRDTQLAESMLAKIWPCVSSFGDSLQRVSYCFAVGLKSRLSLlQSNGNYGNGTGMLTPHGRgaltdsdprpfsREEKVEAFQLLHQ 248
                 68***************************************************975555555443333332222344555678887899999******* PP

        GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                 ++P+l f++l+aN+aI +a +g++r+HiiD+++++ lQW++L++aLasRp+gpp s+RiT++ s + +  +   le+  + La+ A ++g+ ++f+v++
  OWM81078.1 249 ATPYLAFGYLAANEAICQASHGHDRMHIIDLGMEHTLQWASLFRALASRPDGPPkSIRITAITSGSDSldDLSHLETSLKALADEAMSVGIYLQFQVIT 347
                 **************************************************88887********977667788888888899999999**********75 PP

        GRAS 183 ak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                    +   ++ e+L++++gE+l Vn++++lh+ ++es  + +   ++L+++++l P++++vveq+a+hn++ Fl rfle+l+yysa+fdslea+lpr s 
  OWM81078.1 348 DPpSPLLFSRESLNLREGETLFVNSIMKLHQYVKESRGSLK---AILQAIRRLGPTLLTVVEQDANHNGPFFLGRFLESLHYYSAVFDSLEASLPRGSP 443
                 544556679************************87776666...9****************************************************** PP

        GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +r+ +Er++ ++ei+n+vacegaer erhe++ +Wr++l++aGF+++ l+   ++ a+++l+ ++ dgy++  e+g+l+lgWk+rp++ +SaW+
  OWM81078.1 444 QRMRIERVYYAEEIRNIVACEGAERMERHERADQWRRQLGRAGFQAAGLK--CMSRARMMLSVYGCDGYSLAYEKGCLLLGWKGRPIMLASAWQ 535
                 **********************************************9985..89***************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    
MEQEQQQQQH GSAPSPIQYG WEDETEALLE TDQHSPSASE VDQFVDSFFI TDHEDVDHFS  60
EVVPFQPDDH RFEDRDIGSL VGDYDNGYGD VMIDVDRDIQ FMGGEGLGEQ DKFMSGSPID  120
QDDPVVAQET ALASPLEGSG GHGVDQGLHL VHLLLACAEA VGCRDTQLAE SMLAKIWPCV  180
SSFGDSLQRV SYCFAVGLKS RLSLLQSNGN YGNGTGMLTP HGRGALTDSD PRPFSREEKV  240
EAFQLLHQAT PYLAFGYLAA NEAICQASHG HDRMHIIDLG MEHTLQWASL FRALASRPDG  300
PPKSIRITAI TSGSDSLDDL SHLETSLKAL ADEAMSVGIY LQFQVITDPP SPLLFSRESL  360
NLREGETLFV NSIMKLHQYV KESRGSLKAI LQAIRRLGPT LLTVVEQDAN HNGPFFLGRF  420
LESLHYYSAV FDSLEASLPR GSPQRMRIER VYYAEEIRNI VACEGAERME RHERADQWRR  480
QLGRAGFQAA GLKCMSRARM MLSVYGCDGY SLAYEKGCLL LGWKGRPIML ASAWQVPANN  540
HAPSSSSSPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-74GRAS family protein