PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81118.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 328aa MW: 36540.1 Da PI: 6.5063

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.7e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l +++q+G+++W++I++ g+ R++k+c++rw +yl OWM81118.1 14 RGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL 61 89********************************************97 PP
2	Myb_DNA-binding	42.4	1.6e-13	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++ E++ + ++++ G++ W++Ia+ ++ gRt++++k++w++ OWM81118.1 68 GEFSEAEEQTIMRLHAVVGNR-WSLIAAQLP-GRTDNDVKNYWNT 110 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MGRIPCCEKD NVKRGQWTPE EDNKLSSYIA QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY 60 LRPDLKHGEF SEAEEQTIMR LHAVVGNRWS LIAAQLPGRT DNDVKNYWNT KLKKKLSGMG 120 IDPVTHKPFS HLMAEIATTL PPPHVAHLAE AALGCFKDEM LHLLTKKRVN FQLHHPIEPP 180 PGGNTSSPYN SAGVKDETED NAVEKIRLGL SRAIQEHNET TMPVSASKCW VDAAGMAPLS 240 SGNLNGSCSA FPEPEFHYSP TSFMNEGEGS PWNRSLCGET RLNGKLQDEN VEESEGGKDD 300 ERNGSNTLFN SDCVLWDLPA DDLMNPIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56110.1	1e-117	MYB family protein