PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81237.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 368aa MW: 40449.7 Da PI: 9.8473

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81237.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.7	2.8e-10	79	126	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f eL +l + + +K +Ka+iL Av+ + +L OWM81237.1 79 SKACREKLRRDRLNDKFTELGCILEPG---RPPKTDKAAILIDAVRMVTQL 126 5678***************999997...89************99988 PP
2	HLH	11.2	0.00071	157	252	9	54
HHHHHHHHHHHH.HHHHCTSCCC....................................................TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsaf.eeLrellPkas.................................................kapskKlsKaeiLekAveYIksL 54 E+rR + ++++ ++L+++ ++s ++ +K +Ka+iL Av+ + +L OWM81237.1 157 EKRRLKAEKEKLgQQLKTMSTQPSfmpappppvipaafaavphgqvpaprnklvpfisypgvamftelgcilePGRPPKTDKAAILIDAVRMVTQL 252 888888888888888888888866688888888888889999999999999999999999999999999999888999*************99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MVSPESTNWL FDCGLIEDIT VPDGSFQVSG SGFSWPIQAV NESSIFSSKI DGSLGESDGP 60 KETGSKKRNR SEPCGTSSSK ACREKLRRDR LNDKFTELGC ILEPGRPPKT DKAAILIDAV 120 RMVTQLRGEA QKLKESNSSL QEKIKELKAE KNELHDEKRR LKAEKEKLGQ QLKTMSTQPS 180 FMPAPPPPVI PAAFAAVPHG QVPAPRNKLV PFISYPGVAM FTELGCILEP GRPPKTDKAA 240 ILIDAVRMVT QLRGEAQKLK ESNSSLQEKI KELKAEKNEL HDEKRRLKAE KEKLGQQLKT 300 MSTQPSFMPA PPPPVIPAAF AAVPHGQVPA PRNKLVPFIS YPGVAMWQFM PPATVDTSQD 360 HVLRPPVA

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MVSPESTNWL FDCGLIEDIT VPDGSFQVSG SGFSWPIQAV NESSIFSSKI DGSLGESDGP  60
KETGSKKRNR SEPCGTSSSK ACREKLRRDR LNDKFTELGC ILEPGRPPKT DKAAILIDAV  120
RMVTQLRGEA QKLKESNSSL QEKIKELKAE KNELHDEKRR LKAEKEKLGQ QLKTMSTQPS  180
FMPAPPPPVI PAAFAAVPHG QVPAPRNKLV PFISYPGVAM FTELGCILEP GRPPKTDKAA  240
ILIDAVRMVT QLRGEAQKLK ESNSSLQEKI KELKAEKNEL HDEKRRLKAE KEKLGQQLKT  300
MSTQPSFMPA PPPPVIPAAF AAVPHGQVPA PRNKLVPFIS YPGVAMWQFM PPATVDTSQD  360
HVLRPPVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	2e-76	bHLH family protein