PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81521.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 457aa MW: 50922.7 Da PI: 4.8977

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81521.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.2	9.3e-34	239	293	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rW+peLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ OWM81521.1 239 KPRMRWSPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 293 79****************************************************8 PP
2	Myb_DNA-binding	54.9	2.1e-17	241	292	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rW++e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ OWM81521.1 241 RMRWSPELHEAFVEAVNKLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 292 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MEARPALFVQ RSGPQQLSTV RVSGALSSSL PVLPTPLEER YPKLPDSLQV TMEKELTTGP 60 LTHTIPVPSS SGAVGHIFSS NSGYSADLHI SSVSPQEKHP RDTTPFISQS STGKASTLPL 120 QATASTQCTE KNSWCPDPLP DFLDFAADSP VQGTQMENNN SGPGIPVSED FKPTNWQEWA 180 DQLINEDDSL TSTWNELLVD NSVSNPEQPK MASNFPVSQN QLQQQQQLPP SSANTSSSKP 240 RMRWSPELHE AFVEAVNKLG GSERATPKGV LKLMKVEGLT IYHVKSHLQK YRTARYRPEL 300 SEGSSEKKLT PIEEMSSLDL KTGIEITEAL RLQMEVQKRL HEQLEIQRKL QLRIEEQGRY 360 LQMMFEKQCK PGSEKLKASS SCLEDPSGPP EELQQQQDSL NRSESRNSKE DNRPETDPLG 420 SSSPLPEESK EELEEDSRDP EQKLCEFKAS KRQKTDS

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MEARPALFVQ RSGPQQLSTV RVSGALSSSL PVLPTPLEER YPKLPDSLQV TMEKELTTGP  60
LTHTIPVPSS SGAVGHIFSS NSGYSADLHI SSVSPQEKHP RDTTPFISQS STGKASTLPL  120
QATASTQCTE KNSWCPDPLP DFLDFAADSP VQGTQMENNN SGPGIPVSED FKPTNWQEWA  180
DQLINEDDSL TSTWNELLVD NSVSNPEQPK MASNFPVSQN QLQQQQQLPP SSANTSSSKP  240
RMRWSPELHE AFVEAVNKLG GSERATPKGV LKLMKVEGLT IYHVKSHLQK YRTARYRPEL  300
SEGSSEKKLT PIEEMSSLDL KTGIEITEAL RLQMEVQKRL HEQLEIQRKL QLRIEEQGRY  360
LQMMFEKQCK PGSEKLKASS SCLEDPSGPP EELQQQQDSL NRSESRNSKE DNRPETDPLG  420
SSSPLPEESK EELEEDSRDP EQKLCEFKAS KRQKTDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-101	G2-like family protein