PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81612.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 258aa    MW: 26649.2 Da    PI: 7.6403
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.98.4e-064363121
                EEETTTTEEESSHHHHHHHHH CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHir 21
                y+C+ Cgk+F+++  L  H+r
  OWM81612.1 43 YQCSECGKMFKSNKALYGHMR 63
                9*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MKNGINGVLG RRKALSLKLK ASKNGVKKQP LSSEEADGAA SSYQCSECGK MFKSNKALYG  60
HMRCHPDRGW RGFKNPVGIA VGPSLALVGP SWGNAGGFSA EEVEVAAALL VLAGGPCSME  120
SCGGASASPR SGFGLKEGLF TVWEASSNAV EGCGDSTGPG GRPSLKECGW HGTESGAETS  180
MATEEEEEEQ RVVVPLPDVE SFSVSLAAGS WGKCFGVQPG SSRKGLDLNQ LPILIAGKNS  240
SACRGAVNAM VLDLTLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17180.15e-12C2H2 family protein