PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81691.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 199aa    MW: 21797.6 Da    PI: 9.0439
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.62.9e-104687854
                HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                + r+RR+ri ++f +L++l+P a      K++ +++L  A++Y+k L
  OWM81691.1 46 AARQRRHRISDRFKTLQSLVPGA-----HKMDTVSMLDGAIKYVKFL 87
                569*******************9.....7****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MNHQISSKEK TGKVAAGINK KSSPSPLIRQ SKTGAKKLST DPQSVAARQR RHRISDRFKT  60
LQSLVPGAHK MDTVSMLDGA IKYVKFLKAQ ILLHHQLSML FSGRLHPNSG YECDIGQDNR  120
YYYYCHNPDS MATESSSSGS AAEPVDDHLL TPNPRPPTFF SGAVEVQPAG SPQLPDFPAL  180
GPCVDLGEET MLYYGGSYT