PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81711.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 412aa MW: 45997.9 Da PI: 8.5536

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.2	4.9e-10	141	186	3	46
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 rWT+eE +++ +a +++ ++ W ++a++++ g+t +++ +++ OWM81711.1 141 RWTPEENKQFEKALALFDKDtpdKWFRVAEMVP-GKTVGDVIKHYRE 186 9******************************.*********96 PP
2	Myb_DNA-binding	46.1	1.1e-14	250	294	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky OWM81711.1 250 PWTEEEHRQFLMGLKKYGKGDWRNISRFFVTTRTPTQVASHAQKY 294 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MGLFLSRNLA NLLISFSSKR AKLAGAVFPV QIEEMVSLVS RTGRHLQRYD KGCRQVVGCI 60 PYRYRKGGGE LEVLLVSSQK GKAMMFPKGG WEIDESMEEA ALRETIELSS SVEMNRGMEV 120 LSPASYIQNS NWLFQESEEA RWTPEENKQF EKALALFDKD TPDKWFRVAE MVPGKTVGDV 180 IKHYRELEED VSDIEAGLFP VTGYGSSSFT LEWVSGSDHG FDGLKQLYGP CGKRGTSTRP 240 SDQERKKGVP WTEEEHRQFL MGLKKYGKGD WRNISRFFVT TRTPTQVASH AQKYFIRQLT 300 GGKDKRRSSI HDITTGHLPD SNPSSPATSS LDNPPATVTK SQPHDQHQKM GGGMGKGPFG 360 WKQPTEVTSS VTEPFLGGSP YGYKFQEQNL LGGALLGSQF GGCNPVFQMH QY

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MGLFLSRNLA NLLISFSSKR AKLAGAVFPV QIEEMVSLVS RTGRHLQRYD KGCRQVVGCI  60
PYRYRKGGGE LEVLLVSSQK GKAMMFPKGG WEIDESMEEA ALRETIELSS SVEMNRGMEV  120
LSPASYIQNS NWLFQESEEA RWTPEENKQF EKALALFDKD TPDKWFRVAE MVPGKTVGDV  180
IKHYRELEED VSDIEAGLFP VTGYGSSSFT LEWVSGSDHG FDGLKQLYGP CGKRGTSTRP  240
SDQERKKGVP WTEEEHRQFL MGLKKYGKGD WRNISRFFVT TRTPTQVASH AQKYFIRQLT  300
GGKDKRRSSI HDITTGHLPD SNPSSPATSS LDNPPATVTK SQPHDQHQKM GGGMGKGPFG  360
WKQPTEVTSS VTEPFLGGSP YGYKFQEQNL LGGALLGSQF GGCNPVFQMH QY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	1e-111	MYB family protein