PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81793.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 306aa    MW: 34448.5 Da    PI: 8.492
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000225678123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  OWM81793.1 56 YSCSFCRREFRSAQALGGHMNVH 78
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEQPQFLLWT KRRHNLSSHL KLGNNTSSHD DSWEEQAFAE DASGPLGGCI WPPRSYSCSF  60
CRREFRSAQA LGGHMNVHRR DRARLKQSGG EILNSHEHQN QPNQIQGPFV PLGLPYPSQA  120
YATALSHKPN PNCDYSPFVS STSSTSRVSA PPSEASCNEQ TSKIPSYSSF LVNENCTKSP  180
IHSPQSKPQT VSHRYRHPMN AIIGEKNPRI IKQRGMDKED PGKTDLAVSW NLVIRTRPNP  240
LDDEIEESRS CKKRRTDESS LLPFFMKTIA VDRNHCQEPC AFSSSPGEDL DLELRLGDRP  300
KVKLQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.18e-27C2H2 family protein