PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81794.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 167aa    MW: 18770.8 Da    PI: 6.5087
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.84e-052547123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C+k Fs+   L  H++ H
  OWM81794.1 25 YSCTFCKKGFSNAQALGGHMNIH 47
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MDQANASSST REKSDQIADS SLKTYSCTFC KKGFSNAQAL GGHMNIHRKD RAKLIMQSLD  60
DKSHEVVLDL KDVPDDDHHQ HAEPGPDDDQ EHPTDQESRL LTASLSSITG DHEKVRKSHH  120
KMMLKEKKID QVIHGRQRSF PSELDLELRL GHEPQPGSTV RDDGKIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.11e-15C2H2 family protein