PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81806.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 743aa    MW: 83746.2 Da    PI: 6.9057
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS385.94.6e-1183707411374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+av+++d + ++++L++++++asp gd +qRla+++  +L+arla+++s++yk l +++t+    ++ l+a++lf  ++P+ k+s+++ N
  OWM81806.1 370 LRTLLINCAQAVATDDRTSTSQFLKQIRQHASPFGDGNQRLAHCLGDGLEARLAGTGSQIYKGLISKRTA---AADILKAYHLFLAACPFRKLSNFVSN 465
                 6789************************************************************999998...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I +a++ + r+HiiDf+i +G+QWp+L+q L+ Rp+gpp++RiTg++ p++g   +e++eetg+rL+ +Ae++gvpfe+++ +ak++e++++eeL++
  OWM81806.1 466 KTIINAAADSMRIHIIDFGILYGFQWPTLIQRLSMRPGGPPRIRITGIEFPQPGfrPAERVEETGHRLKAYAEKFGVPFEYTA-IAKKWETIKVEELKI 563
                 *****************************************************9*****************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E l+Vn+ ++ ++llde+v+++s+r+ vL+l+++++P+++++   + ++n++ F++rf eal ++salfd+le+ +pre+ er+ +E+e++gre+ 
  OWM81806.1 564 DRDEFLVVNCLYRAKNLLDETVAVDSPRNMVLNLIRKINPDIFIHGIVNGSYNAPFFVTRFREALFHFSALFDMLETLVPRENLERMLIEKEIFGREAL 662
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nv+aceg er+er et+++W+ r ++aGF +vp++ ++++ a+  +r  + + + ++e+  +l++gWk+r ++++S+W+
  OWM81806.1 663 NVIACEGWERVERPETYKQWQVRDMRAGFVQVPFDPEIVQRASDRVRLNYHKDFLIDEDIRWLLQGWKGRIIFALSCWK 741
                 **************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 743 aa     Download sequence    
MGMDPRLRGF PVAVNGISFS NNQPLPFFPD QTLAAVPRFG NASVDNGFRG GIQYHPPEMT  60
RDSLPPCSSG AQEEFPEDCD FSDTMLSYIR QMLMEEDMEE KTCMLQDSLD LQAAEKSLYE  120
AIGKKYPPSP EVIPSCSHTA HPTSEVPDDE FSCNFSNPYQ YNYSGISVAR NFSTYGSTPQ  180
SSYSPSNSAF SRVDGLVDSP GSILQEPDLA SESQLVWQFR KGVKEASKFL PSGNGFLDNI  240
ELKGILSRNL KVKHDEGLVK VERGDEVECL NSPNGSRGRK NRPQREEGDM EEERSSKQAA  300
VFAEPIVRSE MFDAVLLCNH SGGKNHLALL REALKNGTNP NMLQNGQPKE LDGGKGRGKK  360
HGRKKEVVDL RTLLINCAQA VATDDRTSTS QFLKQIRQHA SPFGDGNQRL AHCLGDGLEA  420
RLAGTGSQIY KGLISKRTAA ADILKAYHLF LAACPFRKLS NFVSNKTIIN AAADSMRIHI  480
IDFGILYGFQ WPTLIQRLSM RPGGPPRIRI TGIEFPQPGF RPAERVEETG HRLKAYAEKF  540
GVPFEYTAIA KKWETIKVEE LKIDRDEFLV VNCLYRAKNL LDETVAVDSP RNMVLNLIRK  600
INPDIFIHGI VNGSYNAPFF VTRFREALFH FSALFDMLET LVPRENLERM LIEKEIFGRE  660
ALNVIACEGW ERVERPETYK QWQVRDMRAG FVQVPFDPEI VQRASDRVRL NYHKDFLIDE  720
DIRWLLQGWK GRIIFALSCW KPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein