PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82109.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 243aa    MW: 26108.8 Da    PI: 7.3335
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0015153175123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C k+F +   L  H r+H
  OWM82109.1 153 HQCSVCLKTFASGQALGGHKRRH 175
                 79*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MALEALNSPS SAGPLLHHED MVDHQTWTKR KRTKRSHLDT DMPPSEEEYL ALCLLMLAQG  60
GGRGRPVTTH RPSLSPPPPS ATNNGYKCSV CHREFHSYQA LGGHKSSHKN KAVMEDHQSP  120
GTTAPGPATS SHNNSATKKL GSMNSMSNST RTHQCSVCLK TFASGQALGG HKRRHFEGGS  180
AGGGTGSSLM PLTEDVDSGH SHHHGFDLNL PASSEHSQEA NDVDFVRKSQ LSGDEDVVES  240
DCR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67450.17e-41C2H2 family protein