PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82145.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 254aa MW: 27953.2 Da PI: 9.6043

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.1	2.4e-19	5	50	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+ +G ++W++I+r ++ gR++k+c++rw + OWM82145.1 5 KGPWSPEEDDALRELVRTHGARNWSLISRSIP-GRSGKSCRLRWCNQ 50 79****************************.*********985 PP
2	Myb_DNA-binding	54.4	2.9e-17	59	101	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eEde +++a+++lG++ W++Iar + gRt++ +k++w++ OWM82145.1 59 PFTSEEDETILRAHARLGNR-WASIARLLS-GRTDNAIKNHWNST 101 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MDRVKGPWSP EEDDALRELV RTHGARNWSL ISRSIPGRSG KSCRLRWCNQ LSPGVEHRPF 60 TSEEDETILR AHARLGNRWA SIARLLSGRT DNAIKNHWNS TLKRRWKKRP AQPGSGADLG 120 SSSGSDDSDS SVDFMSSPVL PLAAPPPETV PPGADDPPTV LTLSLPGYSS NRAKSAPPRT 180 GGPFSEEFMA AVQEVIRKEV RDYMAGLERS GGFGFHSQEA ISEGIRTAVI DRMGYNRNFT 240 TRSDRVEIGM LGQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	3e-61	MYB family protein