PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82196.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 334aa    MW: 38728.2 Da    PI: 9.4226
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.82.9e-11321141098
                 HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  l++g l +pk f++++g +      + l  +sg++W+++l  +k+ g++++++GW +Fv+   +  + ++ F+  ++ +f ++  +f+
  OWM82196.1  32 LLQLGKLPIPKAFVKSYGDN--LLNWVLLAVPSGQTWTIQL--EKHNGTVWMGQGWMNFVEYFSVIPKYSISFR--WEGSFLFRTVIFD 114
                 56778999*********977..666899999**********..*******************************..5667756666665 PP
2B349.76.8e-16239327192
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 ff   ++++++++g+ +lp + ++++ g     + ++    sgrsW+v++     ++r v+ +GW +F ++n L egD++vF+++  ++f+ 
  OWM82196.1 239 FFRLILRPSYMRNGQAWLPLSLISRYAGY---RIHVMQLKHSGRSWRVNMHTYSDRKRAVFCRGWVKFLEDNSLHEGDICVFERTAPNKFNV 327
                 666777889999999***********655...245777888*********7777777799999********************766566644 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MASPRTGRNE QLHRTRYKPE HPHFLRVILP ELLQLGKLPI PKAFVKSYGD NLLNWVLLAV  60
PSGQTWTIQL EKHNGTVWMG QGWMNFVEYF SVIPKYSISF RWEGSFLFRT VIFDQTGCEI  120
KYPLWCSHCK RLKVNDVFPS QKREGTHENA KMAAEADDDY RTHLSALGVN IRSEREEARE  180
VDSDVKMPAE EHDDDFRAHL SALGINIRSG RATAAGGVTY HTHDEAKLAS SQFHSNYPFF  240
RLILRPSYMR NGQAWLPLSL ISRYAGYRIH VMQLKHSGRS WRVNMHTYSD RKRAVFCRGW  300
VKFLEDNSLH EGDICVFERT APNKFNVITF ICAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-29B3 family protein