PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82204.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 345aa    MW: 37762.1 Da    PI: 6.0456
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-20153202255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  OWM82204.1 153 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 202
                 59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MAAAVLSDPF GEELMRALQP FMKSASESPS SSSSSSSSPP SPSSSPPQFL PSCSPFAYPS  60
FVYQNYPSCS SYSPMIPSQP DLLSDLECLG SNSIGLNNLT PAQILQIQSQ LNQIQFQQPA  120
FPASHRSHHP VNFLGPRAVP MKHSGTPPKP NKLYRGVRQR HWGKWVAEIR LPKNRTRLWL  180
GTFDTAEEAA LAYDKAAYKL RGDFARLNFP HLKHQDSQLG DYNPLHSSVD AKLNAICQNL  240
AASPQKPGRA RGHCGEPKSK APVPVIPKEE VGFEASPELS RNSVVENENE NSSSSPALSD  300
EGSRDGSSSP ESIISFLDFP ESGWEENDPF GLEKFPSVEI DWEAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.18e-57ERF family protein