PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82218.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 393aa MW: 42850.5 Da PI: 6.32

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.1	4e-07	174	195	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H OWM82218.1 174 FCDICGKGFKRDANLRMHMRAH 195 6*******************99 PP
2	zf-C2H2	13.4	0.00024	262	285	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ ksFs +L++H++ + OWM82218.1 262 YSCNRCNkKSFSVLADLRSHMKHC 285 99*******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MAHSGEPPQI PLELPSGGAS SSSGPAVGSA DPRVPLLNLS TVRMRMDSVQ QFLSQSLNSN 60 TLLSGEQMDL VSSEIVSAIH QIIVNGAALL SCSQQAPENP GSKPAAVAAA AAAVEESGDR 120 KLPVKSPIGR PPTGDLKVEE GVLTTMKDEK DELVGDCEIV ELDSVELLAE HTHFCDICGK 180 GFKRDANLRM HMRAHGNQFK TPEALARPDS QCPEPSPSTK RSRFSCPFEG CNRNKAHKKF 240 RPLKSVVCVK NHFKRSHCPK MYSCNRCNKK SFSVLADLRS HMKHCGEAKW KCSCGASFSR 300 KDKLFGHMAL FEGHMPAVAD DDDKRNEATA VEEEEDEDML LKDEELTRNS LDDGIFKRLL 360 DGFGSVDFYC LRDILSPANE LGSGNGISMF SDT

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MAHSGEPPQI PLELPSGGAS SSSGPAVGSA DPRVPLLNLS TVRMRMDSVQ QFLSQSLNSN  60
TLLSGEQMDL VSSEIVSAIH QIIVNGAALL SCSQQAPENP GSKPAAVAAA AAAVEESGDR  120
KLPVKSPIGR PPTGDLKVEE GVLTTMKDEK DELVGDCEIV ELDSVELLAE HTHFCDICGK  180
GFKRDANLRM HMRAHGNQFK TPEALARPDS QCPEPSPSTK RSRFSCPFEG CNRNKAHKKF  240
RPLKSVVCVK NHFKRSHCPK MYSCNRCNKK SFSVLADLRS HMKHCGEAKW KCSCGASFSR  300
KDKLFGHMAL FEGHMPAVAD DDDKRNEATA VEEEEDEDML LKDEELTRNS LDDGIFKRLL  360
DGFGSVDFYC LRDILSPANE LGSGNGISMF SDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	2e-78	C2H2 family protein