PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82221.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 250aa    MW: 28950.7 Da    PI: 10.4058
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.91.2e-1526117199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffkv++ ++  +s r+ +p kf++++g     +  + l+ ++g+s++vk+  +   g+++l++GW++F +   + eg f+vF+l++++   l+v +f++
  OWM82221.1  26 FFKVMVGESLDRS-RIEIPPKFIRKYGDR--LPHLVLLKAQNGESFRVKV--EEAEGKVWLGRGWRKFESHYAIMEGSFLVFQLERSDV--LRVLIFDS 117
                 8899988777776.6***********866..7889***************..*******************************987444..59999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MPMASKRRRG AVKLQHGSFR SAIPRFFKVM VGESLDRSRI EIPPKFIRKY GDRLPHLVLL  60
KAQNGESFRV KVEEAEGKVW LGRGWRKFES HYAIMEGSFL VFQLERSDVL RVLIFDSSAT  120
EIAYPPANRS HNQRPMLNNE AEESGDDDDD ALLEGRDASE PAQKRSRRSR RFQRSMPTKQ  180
LPIEDSDDSS TYLPSEQSAE SESETESSEL EYRRTTSRWK RATLGQSLRG VRGLELWRSL  240
YLRVLTKRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.11e-17B3 family protein