PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82222.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 404aa    MW: 45781.9 Da    PI: 9.5396
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.16.6e-1838126196
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 ffkv+++   l +gr+++p+kf+ ++g +   s  + l+d+sg+s+ev++  +   g+++l+kGW+eF +   ++eg f+vF+l+g++ f  +v +
  OWM82222.1  38 FFKVMVR-ELLHRGRIMIPRKFIWKYGDV--LSELVLLRDPSGESFEVQV--EEAEGKVWLGKGWREFEEHYPIEEGSFLVFELEGNNLF--HVLI 126
                 7788754.6677889***********988..8889***************..********************************998777..6655 PP
2B351.41.9e-16306399298
                 EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 + +l ++ +++sg +++  +f++++  +++++++ l l++ +grsW+vk+ +y+k  ++  l +GW  F ++n L+ gD++vF+l++++ f  +v++fr
  OWM82222.1 306 CIQL-RPTYTRSGGVSICSSFMKRNnFKPTKGPVYLNLKH-RGRSWRVKMfCYTKEHRG-KLCGGWGAFIEENSLQNGDVCVFELVETNIF--RVHFFR 399
                 5566.455566677***********644555666666555.99*******444555544.5777*********************998888..777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MSIGSIPYPS PMASAHTHRG RRAVKLQDGF FKSPTPRFFK VMVRELLHRG RIMIPRKFIW  60
KYGDVLSELV LLRDPSGESF EVQVEEAEGK VWLGKGWREF EEHYPIEEGS FLVFELEGNN  120
LFHVLILGMC ATEIDYPTVN RSQDPQLEPS DEYLPSETEE TSDDDSPVKS TDASNSEPEQ  180
KRSRCGQPFQ HSKPSKLPTE DSDDSSTYSP SVQSESESES ERLGSTKRST TRLRKEAKQG  240
PSSHLAAGGS GIKKRTIGLQ KRVKLGHSSR RAAGCRRPYV NLPLPPSSHK ALEAAKRFQT  300
KFPAFCIQLR PTYTRSGGVS ICSSFMKRNN FKPTKGPVYL NLKHRGRSWR VKMFCYTKEH  360
RGKLCGGWGA FIEENSLQNG DVCVFELVET NIFRVHFFRC STYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-18B3 family protein