PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82223.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 336aa    MW: 37972.4 Da    PI: 6.7136
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82223.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.68.3e-1716107199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffk+  ++++l++g +++pk+f++++g +   +  ++l+ ++g+sW+v l  +k++++++l+kGW eF +   ++e   v F ++++s f   v +f+k
  OWM82223.1  16 FFKII-HPYSLRLGKISIPKRFVRKYGDN--LPNAVILKVPNGESWKVWL--EKCDDAFWLQKGWPEFIEHYSIEEQYLVNFCYVKKSVF--QVVIFDK 107
                 66655.99******************988..7889***************..********************************998999..9999987 PP
2B353.73.7e-17237332197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ff vl+++++ ksg + ++k f+ ++++++  +++++l++ s r W v ++y + k ++  l +GW  Fv++n++k+gD+++F+l+++++  ++v+v+
  OWM82223.1 237 FFHVLMTESYVKSGSVAISKGFIVRNNLEE-APQKVMLRH-SDRLWPVSMNYyKAKARGGSLCGGWAAFVRQNHIKVGDICIFELVKKKGVIFNVTVL 332
                 89999*********************8874.677999888.99*******99644444577889*********************9877776677666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MEETGGSHFE SPTPHFFKII HPYSLRLGKI SIPKRFVRKY GDNLPNAVIL KVPNGESWKV  60
WLEKCDDAFW LQKGWPEFIE HYSIEEQYLV NFCYVKKSVF QVVIFDKSAT EIEYPLKSAN  120
VKRVKPVPES LSSEMEESAY KTSPGTLSGY EVEQEIECGH VEPDVESSSS EMEESTDNSV  180
SIMRDLEPAM EISCDSDDLT PNSGKAINVA PPVSLTRRIL KFAKSSEAVN FRSEYPFFHV  240
LMTESYVKSG SVAISKGFIV RNNLEEAPQK VMLRHSDRLW PVSMNYYKAK ARGGSLCGGW  300
AAFVRQNHIK VGDICIFELV KKKGVIFNVT VLRCGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-34B3 family protein