PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82265.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NF-YB

Protein Properties

Length: 102aa MW: 11291 Da PI: 8.7342

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	164.1	1.9e-51	16	102	3	89
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 +qd flPianvsrimkk lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plkvyl++ OWM82265.1 16 DQDGFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNR 102 79***********************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 102 aa Download sequence
MSPAGSPPSL SPNRLDQDGF LPIANVSRIM KKSLPANAKI SKEAKETVQE CVSEFISFIT 60 GEASDKCQRE KRKTINGDDL LWAMTTLGFE NYVGPLKVYL NR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	2e-56	NF-YB family protein