PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82273.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 236aa MW: 26848.6 Da PI: 5.6434

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.4	3.9e-30	140	198	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++pr+YY+C+s gC vkk+ver++ed ++v++tYeg Hnh+ OWM82273.1 140 MDDGYKWRKYGKKSVKNSPNPRNYYKCSSGGCLVKKRVERDREDASYVITTYEGVHNHH 198 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MDYPGNPSPS YNYSNFAENF EPFEFELSDY LVPGDGTWDN LGVENMATSS SSEKVEDNPN 60 GFVHAAEEDY SNDNMQVNLR SDPNATYFLL LEYFFCFSIS DLLVVYIFLF CRKHVKGLKE 120 KKIERGSKVA FRTKSELEIM DDGYKWRKYG KKSVKNSPNP RNYYKCSSGG CLVKKRVERD 180 REDASYVITT YEGVHNHHSP SSTSSSNLNS LLYYATSTEP QAAAYSNNYS HSSPSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	6e-35	WRKY family protein