PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82340.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 180aa MW: 20188.5 Da PI: 10.4173

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0017	45	67	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H OWM82340.1 45 FECKTCKRRFPSFQALGGHRASH 67 89**********99999998887 PP
2	zf-C2H2	13.5	0.00021	99	121	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs L H+r+H OWM82340.1 99 HECSICGLQFSMGQALGGHMRRH 121 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MKRSRAEFDI FENSNIDLAK CLVLLSQGVG LKHAVTSMQR EDGHFECKTC KRRFPSFQAL 60 GGHRASHKRP RLLDQGIPEE EDTKKILTTL SLSTKPKMHE CSICGLQFSM GQALGGHMRR 120 HKVEMTRQSS KPSSAIPAVP VLKRSNSSKR VACLDLNLTP LENDLKWIFG KMAPKLDGFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	1e-53	C2H2 family protein