PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82369.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 299aa    MW: 32224.1 Da    PI: 9.9506
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.2e-144387147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
       OWM82369.1 43 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 87
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MNSNSSSSNP PSMATSTASA PATTAADSSG KKVRKPYTIT KSRESWTEEE HDKFLEALQL  60
FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTVAHV PPPRPKRKAA HPYPQKASKN  120
GKPLSYLWDA FLVPLQASAV HPSSIRAFTI TPGNAQWDDS SILISSSSGN TIPGLDEFTN  180
LQVAEGVKPL SDVGSKGAAR INNSSVSGVG STSRTLPSSD LSKPKRQGQV LHGLPDFAEV  240
YSFIGSVFDP ESNGHVQKLK EMDPINFETR KALSSHDINT KTGAVSLGVL TGNQSDACS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.12e-79MYB_related family protein