PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82419.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TCP

Protein Properties

Length: 221aa MW: 23227 Da PI: 7.606

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112.4	6.4e-35	55	142	4	83
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....sec.....eaesssssas 83 ++++++hTkv+gR+RR+R++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i ++tg++++++ s + ++s+sss+s OWM82419.1 55 TSSSSKDRHTKVNGRGRRIRIPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIVAATGSGTIPSgpvsS-TaralpPPSSRSSSVS 142 56789*********************************************************8888843321.1233333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MVSDSPFHQL PSSAPPRSSD HTPATSLAVI PAAADPPSTS NSQSSGPLSR KAGPTSSSSK 60 DRHTKVNGRG RRIRIPALCA ARIFQLTREL GHRSDGETIE WLLRQAEPSI VAATGSGTIP 120 SGPVSSTARA LPPPSSRSSS VSCPVQPAEG HAVVPFPLAP SGFRLDLCPP MGFSYSSAAN 180 AAEDAVNGYR HMPFTALLLQ PAAAMEKDEE RKQEEVLAEE Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	7e-40	TCP family protein