PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82499.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 573aa MW: 62492.2 Da PI: 4.7724

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	93.5	2.4e-29	132	248	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT................XTTSEEEE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks................kekiweFk 82 Fl+k++++++d+ l+ +isw ++g+sfvv+d+ efa+ +Lp+ Fkh+nf+SFvRQLn+Y + v+ + +++ weF+ OWM82499.1 132 FLSKTFDLVDDPLLDPVISWGSSGQSFVVWDTVEFARAILPRNFKHNNFSSFVRQLNTYVGSIVSLIVMFFSGtlfgltpllmwgfrkiDTDKWEFA 228 9********************************************************99999987765444689999888887775549** PP ESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 83 hksFkkgkkellekikrkks 102 ++sF++gk++ll++i+r++s OWM82499.1 229 NESFQRGKRHLLKNIQRRRS 248 ***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MDPDDSRCPK PAPAHTTAIR TALSSSSSSS SSSSAHMESL AGASGIGFSV VLPEAEPFSM 60 ASQSQPPSPG SLFMENVGFS ELQSFSPDEL FELKPEPVSE IPPAAPSRGG EVEGLGLPQP 120 LGCLQGTPIP PFLSKTFDLV DDPLLDPVIS WGSSGQSFVV WDTVEFARAI LPRNFKHNNF 180 SSFVRQLNTY VGSIVSLIVM FFSGTLFGLT PLLMWGFRKI DTDKWEFANE SFQRGKRHLL 240 KNIQRRRSPQ GQQVGSFGGS SSEASRSGVE VEVGKLRKEK SALMQQVIEL RQQHSGTAQH 300 VETVNQRLRA AEQKQKQMVS FLGKLFQNPD FIARLRERKE RREIGPPRMR RKFIEHHQHE 360 GMEPDPSTEE QLVEYQHEQR NIGSGSISGS LGLNLVSVEP AVVTGTGGML LQFDTVRPQE 420 LQMSGELLPG QGFAGMPVPA GPSNLGEGDP FFKGKSVATG SEQVLMPEYF LSFPDELVDK 480 RNFLEFPEGV DGIAKQGEVW SMGFDVGPVG LPSSSSELWP NLSSSDVPES GLAGSLSDMW 540 DLGSVQMPGG TDVDKWPAQE PTFDEHDNSP GEK

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MDPDDSRCPK PAPAHTTAIR TALSSSSSSS SSSSAHMESL AGASGIGFSV VLPEAEPFSM  60
ASQSQPPSPG SLFMENVGFS ELQSFSPDEL FELKPEPVSE IPPAAPSRGG EVEGLGLPQP  120
LGCLQGTPIP PFLSKTFDLV DDPLLDPVIS WGSSGQSFVV WDTVEFARAI LPRNFKHNNF  180
SSFVRQLNTY VGSIVSLIVM FFSGTLFGLT PLLMWGFRKI DTDKWEFANE SFQRGKRHLL  240
KNIQRRRSPQ GQQVGSFGGS SSEASRSGVE VEVGKLRKEK SALMQQVIEL RQQHSGTAQH  300
VETVNQRLRA AEQKQKQMVS FLGKLFQNPD FIARLRERKE RREIGPPRMR RKFIEHHQHE  360
GMEPDPSTEE QLVEYQHEQR NIGSGSISGS LGLNLVSVEP AVVTGTGGML LQFDTVRPQE  420
LQMSGELLPG QGFAGMPVPA GPSNLGEGDP FFKGKSVATG SEQVLMPEYF LSFPDELVDK  480
RNFLEFPEGV DGIAKQGEVW SMGFDVGPVG LPSSSSELWP NLSSSDVPES GLAGSLSDMW  540
DLGSVQMPGG TDVDKWPAQE PTFDEHDNSP GEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	2e-78	HSF family protein