PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82509.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

GRF

Protein Properties

Length: 317aa MW: 34426.2 Da PI: 7.9952

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	82.8	2.8e-26	73	116	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e OWM82509.1 73 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVE 116 79***************************************987 PP
2	QLQ	57.6	3.8e-20	3	39	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F++aQ+q+L+ Q+l+y+y++a++ vPpeLlq+i+k OWM82509.1 3 SYFSWAQWQELELQALIYRYMMAGATVPPELLQPIKK 39 79*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MGSYFSWAQW QELELQALIY RYMMAGATVP PELLQPIKKS LLLHSSPYFL HSHFPPPQYP 60 PSAAWYWGRA AMDPEPGRCR RTDGKKWRCS RDVVAGQKYC ERHMHRGRNR SRKPVEIPTT 120 ATSATANSTG DIFKTTCPIT SAGGTTLSAM TGGGGSHFSL SGFSPSSSID IFHLNQSYSS 180 EVKPESRGGG LFGAENPADS RPDGHVLRHF FDDWPRSLQE SDNTGGTDNS STCLSISDVS 240 LKLSTGNGDE PSRNPDRDHH PPMSTWAAGW GSNHVAPMGG PLAEALRSSL NATHSSPTSV 300 LHHLPRGSAS EASFVST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	3e-76	GRF family protein