PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82549.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 296aa    MW: 33644.6 Da    PI: 7.1321
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM140.11.4e-4351401128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                 lppG+rF Pt+eelv++yL+kk++g + +l++    vi+++diy+++PwdLp+     +++++++w+fF++r+ ++a+g r++r t+ gyWkatg+   
  OWM82549.1   5 LPPGYRFYPTEEELVQFYLQKKLDGMNADLNRildrVIPTLDIYEFNPWDLPQfageVCQGDTEQWFFFIPRKDSEARGGRPRRLTTFGYWKATGSPGC 103
                 79************************95543333337***************656755555777*********************************** PP

         NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 v+s++++ vglk+t+vfykgrap+g+kt+W m+ey++
  OWM82549.1 104 VYSSSNRIVGLKRTMVFYKGRAPNGSKTEWKMNEYKV 140
                 ***********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MENYLPPGYR FYPTEEELVQ FYLQKKLDGM NADLNRILDR VIPTLDIYEF NPWDLPQFAG  60
EVCQGDTEQW FFFIPRKDSE ARGGRPRRLT TFGYWKATGS PGCVYSSSNR IVGLKRTMVF  120
YKGRAPNGSK TEWKMNEYKV LEGVLADHDL CDDSSTIPQL LRQEYSLCRV YKKSKILRAF  180
DRRPTAAGGS SSYQLPGQGL ASGDRLNYEE TTTILSDHHH HHLHHHHQQH QTTCNNDINL  240
SPEVERTTTL IDSSSPNSSS SSGEVGRRGR ISGSSGHDAV MLPIGCTVPL WDWINN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-69NAC family protein