PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82595.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NF-YA
Protein Properties Length: 312aa    MW: 34103.4 Da    PI: 8.8317
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA91.11.5e-28144199258
   CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  p++VN+KQy++I+k R++Rak+e ++k  ++ rkpy+heSRh hA+rRpRg+gGrF
  OWM82595.1 144 VPIFVNPKQYHAIMKSRERRAKAELKNKQ-NRVRKPYMHESRHLHAMRRPRGCGGRF 199
                 59**************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MTTEAVYFKE HEGIMHNSAG QLSSPLAPGL WWGAGYGAQS FQSNSSQLER TGCGDHFAAS  60
KQAEQGTKQS ADKGSVTQSI FSGDGLKSHA ALPEYCSRFE PGFSQPMICA KYPYVDPCYG  120
VLSAHGPQLS GRIMLPLDLG TNDVPIFVNP KQYHAIMKSR ERRAKAELKN KQNRVRKPYM  180
HESRHLHAMR RPRGCGGRFL NTKNLPSCKG EADLEKDFKP PERPTGSQGS EVLQSDSGTL  240
SSPRGANGSI TSLSGSTEVT SNTYAREDLG RLSMNFLRPP LHFLPLNGMI DTGHSIVKPS  300
TWVTAADDCR DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.21e-49NF-YA family protein