PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82641.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 188aa    MW: 20597.9 Da    PI: 11.3293
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000343355123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C + F++   L  H++ H
  OWM82641.1 33 FVCSYCARAFPSTQALGGHQNAH 55
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MVRPKAKPSK GLVLRPDIIA GGEWLSLEPP FAFVCSYCAR AFPSTQALGG HQNAHRKEKK  60
DKKKRLAKAK NALQGMSMIS PQPLGMIYPS LPSSLALQNG PFLPVHFPQY PLNHHPAGFV  120
LMQQGQPRNH KGKGIMIFQE GRKKRGPRGE APRGQPHKNA RSNGLARQSS SIGSSSGLIN  180
DLDLELRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.19e-09C2H2 family protein