PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82784.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GeBP
Protein Properties Length: 370aa    MW: 41159.8 Da    PI: 6.2759
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82784.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57389.93.1e-28162253397
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 fqr+ws+eDei++L G+i+f +k+g++p+ di+ f+ef+k+++++ v   ql +Kir  K+Kfk+++++a +gk     +++d+ ++els+++W+
  OWM82784.1 162 FQRVWSDEDEIAFLEGMIEFWEKRGVDPKLDINSFHEFIKGRLHLAVVPAQLANKIRTCKRKFKNNQARAMNGKG---VRPNDRRAYELSRRLWD 253
                 9********************************************************************666665...89**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MAPKRPAPAD KQPPPAVSTD EESSESAGSE EEEEEEDDES YDSDEPRGFQ QKAPQPKPSS  60
APPPRAQTKP QKPVSSSEPE SESESDESKG NLAESDSESD CDVTHVAAAK PVEGEGTPKS  120
KKLILKRPAA EDAATTHSKK SNAASRSSRN PGEEGSSKKT PFQRVWSDED EIAFLEGMIE  180
FWEKRGVDPK LDINSFHEFI KGRLHLAVVP AQLANKIRTC KRKFKNNQAR AMNGKGVRPN  240
DRRAYELSRR LWDSEEGIIG ENSVPKATKK RKTSTATVVP MKVKGKDKMA ETWHNDASPM  300
SLCEAELSRI LDGHLNGSSL RRGLEHMSDS RKEKMEEEWE KLQLAELQVQ ANRALMIHEH  360
ANLIINAYKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.19e-22GeBP family protein