PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82969.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 417aa MW: 45479.1 Da PI: 7.4169

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.4e-17	45	89	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+ OWM82969.1 45 REKWTDEEHQRFLEALKLYGRG-WHQIEEHVG-TKTAVQIRSHAQKF 89 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MAAQDQNEGT TTSTASNMDQ TREIYSFEND IAPKVRKPYT ITKQREKWTD EEHQRFLEAL 60 KLYGRGWHQI EEHVGTKTAV QIRSHAQKFF SKVARGVNGN SDGSVVPIEI PPPRPKRKPV 120 HPYPRKSVDA KGTSNSYQPE RSPSPNFSSM EKESGSPTSV LSAIFSEGHQ SGSRSPTSCT 180 TELPSVSLAA AGKVSNASEE GESGKGCSTS TPRKLPSMSC DSKSRNSSSP DGVGGTNAPF 240 TAIKLFGSTV MVAEVEKQSP GDTNKGQENS TTEDVNKLDE SSHSNENQDT QLSLGKIYNG 300 PNPFSSRQFS PDGSLQLWPL YQCPPFIYFA PGNRPPESRP TNEKEKSCSG SDSTISTNEG 360 EAGERNADIV DSKCEKKLCE ARRGFVPYKR CAAEIEVKLG ETSAPEERQP QRARVCS

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MAAQDQNEGT TTSTASNMDQ TREIYSFEND IAPKVRKPYT ITKQREKWTD EEHQRFLEAL  60
KLYGRGWHQI EEHVGTKTAV QIRSHAQKFF SKVARGVNGN SDGSVVPIEI PPPRPKRKPV  120
HPYPRKSVDA KGTSNSYQPE RSPSPNFSSM EKESGSPTSV LSAIFSEGHQ SGSRSPTSCT  180
TELPSVSLAA AGKVSNASEE GESGKGCSTS TPRKLPSMSC DSKSRNSSSP DGVGGTNAPF  240
TAIKLFGSTV MVAEVEKQSP GDTNKGQENS TTEDVNKLDE SSHSNENQDT QLSLGKIYNG  300
PNPFSSRQFS PDGSLQLWPL YQCPPFIYFA PGNRPPESRP TNEKEKSCSG SDSTISTNEG  360
EAGERNADIV DSKCEKKLCE ARRGFVPYKR CAAEIEVKLG ETSAPEERQP QRARVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	1e-52	MYB_related family protein