PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82972.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 280aa MW: 32669.9 Da PI: 7.1892

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82972.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.3e-18	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G+++W++Ia++++ gR++k+c++rw++ OWM82972.1 4 RGHWRPSEDEKLRELVEQYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49 899***************************.*********996 PP
2	Myb_DNA-binding	55.7	1.2e-17	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ ++ +G++ W+ Iar ++ gRt++ +k++w+ OWM82972.1 56 RSPFTEEEEERLLASHRIHGNR-WSVIARLFP-GRTDNAVKNHWHV 99 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MCTRGHWRPS EDEKLRELVE QYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRSPFT 60 EEEEERLLAS HRIHGNRWSV IARLFPGRTD NAVKNHWHVI MARRSRERSR LYAKRAAHTL 120 ITNERKSSSS SNSAVPSNYN SYHQQQDLDQ MVMSCMARNR LTSSFVPFVT HNSLPIFPKE 180 FYFDNCPSNN FMPTSTHEDK NRPTEFYDFL NVNSDSGATT RSEVTDPTRR LDYRQPHEAL 240 EEEEEVDQAA KNNDRDDDDQ HHRGNSSNVP FIDFLSVGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	1e-78	MYB family protein