PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM83013.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 296aa    MW: 32610.5 Da    PI: 7.2333
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM83013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.4e-08182229455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  OWM83013.1 182 SHSLAERVRRGKINERLRCLQDIVPGC----YKTMGLAVMLDEIINYVQSLQ 229
                 8*************************8....355899999********9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MAHDYAPPSI GSDFHNLRTP PIPSFLEMDP SMDHFHFTDQ LNNPTPTTTI LDASSVILPS  60
TLNFQNHPMI FPEFAGSLAD TFPGIVFHPA GEQVPGLAPH TVPAMGNDQL CESRKRKAAD  120
ASESSSGVSS HSPPASGLGA KRKTGSGRSK RMKNSEKVEE HQEEKRKEVV HVRARRGQAT  180
DSHSLAERVR RGKINERLRC LQDIVPGCYK TMGLAVMLDE IINYVQSLQN QVEFLSMKLT  240
AASSFYDFNS ESDAIDKMQR AMAGEAKELQ RMAREGSNGS GHQSNNFHST SSPWHP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114143RKRKAADASESSSGVSSHSPPASGLGAKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.11e-64bHLH family protein