PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM83093.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 282aa    MW: 31127 Da    PI: 6.8197
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM83093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.71.1e-12556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+eE+e l  +v+++G+g Wk I r          R+  ++k++w++ 
       OWM83093.1  5 KQKWTAEEEEALRAGVAKHGTGKWKDIQRDPEfnqflFSRSNIDLKDKWRNM 56
                     79**********************************989***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGNPKQKWTA EEEEALRAGV AKHGTGKWKD IQRDPEFNQF LFSRSNIDLK DKWRNMIGGG  60
SGQGARDKSR VLKTKATQDV PSTAAVQAPS VPVQDDASAD ATVDGPSKAL DDGKSAPRYN  120
AMIFEALSAL KEPNGSDIGA IFNYLERRHE LQPNFRRLLS SRLRRLVGQD KLEKVQNGYK  180
LKEETGVETK MPAPLREKDI RPRQLPPPTT TTTTANVNFG ETIEDAAVAA AYKIAEAENK  240
AFVAAEAVKE AERVSKMAED ADSMLLLARE AWEMSLCSWH EG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.12e-55MYB_related family protein