PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM83163.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 193aa    MW: 20961.8 Da    PI: 10.7719
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM83163.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.41.1e-195386134
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  OWM83163.1 53 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 86
                *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MMSSNQAGGN RVAVNSAHKF EDQKKIPSPP AVESDTSTKG SSYRNTDSTV RVCSDCNTTK  60
TPLWRSGPRG PKSLCNACGI RQRKARRALA AAAAAVANGT INPPATPSIK IKVKSKTKRQ  120
KNDSSNGPQF KKGCKNKLPR NSSPTKKINN FCYEDFTSRI LSKHYSAYQG VFPQDEREAA  180
ILLMALSYGL VHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.13e-32GATA family protein