PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83321.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NF-YB

Protein Properties

Length: 195aa MW: 21655 Da PI: 6.5075

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	175.8	4.2e-55	24	120	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+t+ea+d+cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yreleg++ OWM83321.1 24 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANDRCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGDR 120 69*********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MALSNNSSNN NNHNSSEDSN ECTVREQDRF MPIANVIRIM RKILPPHAKI SDDAKETIQE 60 CVSEYISFIT GEANDRCQRE QRKTITAEDV LWAMSKLGFD DYIEPLTLYL HRYRELEGDR 120 GSLRAESLVK RTAVDYGATP LGVAGFARGF HVGHHHHGYY GGSPNMAGGY FKDVNGTEGS 180 SQAALAGRDA QAQCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	1e-70	NF-YB family protein