PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83350.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 514aa MW: 57789.8 Da PI: 8.5486

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83350.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.5	1.8e-16	35	117	10	98
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT.--TT-EEEEEE-SSSEE..EEEEE- CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkang.LkegDfvvFkldgrsefelvvkvfr 98 ++s+ l +pkkfae++++k + + l+ +sg W+v l ++ ++++GW+eFvk+++ L e+D+++Fk++g+s f v +f+ OWM83350.1 35 DFRSH-LAVPKKFAENMKNK--LGENVFLKGPSGSIWKVGL--AAEEEGLFFKRGWEEFVKDHHpLAENDVLMFKYNGNSLF--EVLMFD 117 44555.99****666544..6679***********..9999***********87699********99888..666665 PP
2	B3	41.9	1.7e-13	391	475	1	88
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+ v+ ps+v+ + l++p + a++h ++ ++ + l+++d r+W+ + y+ + ++ + ++GW++ v +n+L+e D+++F l ++ OWM83350.1 391 FLVVMRPSHVHINFYLSIPVEWADKHLSPCNQRIILRMKD---RTWTALYYYTSRNCGGISASGWRSLVLENNLQESDVCLFDLGDSI 475 78899*******************87866666666665...***9976667777899******************86653 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MEEDEKTCRD CRSWEEDIYW THFHFIHFFQ FLHGDFRSHL AVPKKFAENM KNKLGENVFL 60 KGPSGSIWKV GLAAEEEGLF FKRGWEEFVK DHHPLAENDV LMFKYNGNSL FEVLMFDHWS 120 LCEKEASYFC KRREQMERDS EVGKKRKARE GPEVVIESPL PQDDAPRAPA EEPGKPEETV 180 PTPTLRQQRT ATRKRASPGM KTKAREGSEV FIEFPLPQDA PAEEPQQLEE TVPTTTVRSR 240 RIGTRKRASP GMKRKSGEGF KVVIESPSPQ VASARAPVEE PQKPGETLPT ATVSEHRILT 300 RKRASFGNIG KASSSAVIDQ EKKGGSLKSL SVSGIPPIKE KVMRRRSARE GLRFTHTYVS 360 RKIAALGKSP EQVLAIQAIQ QAQAAMKSES FLVVMRPSHV HINFYLSIPV EWADKHLSPC 420 NQRIILRMKD RTWTALYYYT SRNCGGISAS GWRSLVLENN LQESDVCLFD LGDSIDGMVV 480 LDVTIFRAVE SATPALTVSQ ASAPATDGLE GNVC

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MEEDEKTCRD CRSWEEDIYW THFHFIHFFQ FLHGDFRSHL AVPKKFAENM KNKLGENVFL  60
KGPSGSIWKV GLAAEEEGLF FKRGWEEFVK DHHPLAENDV LMFKYNGNSL FEVLMFDHWS  120
LCEKEASYFC KRREQMERDS EVGKKRKARE GPEVVIESPL PQDDAPRAPA EEPGKPEETV  180
PTPTLRQQRT ATRKRASPGM KTKAREGSEV FIEFPLPQDA PAEEPQQLEE TVPTTTVRSR  240
RIGTRKRASP GMKRKSGEGF KVVIESPSPQ VASARAPVEE PQKPGETLPT ATVSEHRILT  300
RKRASFGNIG KASSSAVIDQ EKKGGSLKSL SVSGIPPIKE KVMRRRSARE GLRFTHTYVS  360
RKIAALGKSP EQVLAIQAIQ QAQAAMKSES FLVVMRPSHV HINFYLSIPV EWADKHLSPC  420
NQRIILRMKD RTWTALYYYT SRNCGGISAS GWRSLVLENN LQESDVCLFD LGDSIDGMVV  480
LDVTIFRAVE SATPALTVSQ ASAPATDGLE GNVC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	147	KRREQMERDSEVGKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	5e-30	B3 family protein