PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83645.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 481aa MW: 54522.6 Da PI: 10.1619

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83645.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	65.7	6.8e-21	23	119	1	100
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffk+ ++s + +sg lv+pkkf++++g + +s ++l+ +sg Wev+l r+ +g+++l++GW +Fv+ +k gDf+vF +++rs+ e+ v +f+k OWM83645.1 23 FFKIILHS-TIQSGKLVIPKKFVRKYGAELSKSNVVRLKVPSGDAWEVEL--RREDGAVWLENGWMDFVNFYSVKHGDFLVFWYKSRSSNEFDVVLFDK 118 66666555.555667*********87777999************..*******************************99999999999998 PP S CS B3 100 s 100 s OWM83645.1 119 S 119 5 PP
2	B3	52	1.3e-16	215	310	7	99
.-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS B3 7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 p +v+ l +p +f+++++ k +s +l+l+ + + W+v+++ r++ ++ vl++GWk Fv +ngL gD++vF+ ++ ++ +++v++fr+ OWM83645.1 215 PYYVHPPYELNVPGRFVQRYMDHK-GSSQLKLYVSGDKIWTVRCKSgvrRGQVKAKVLGRGWKAFVVDNGLVLGDVCVFESIRGlRSISFKVTIFRA 310 555666667999******7665.5569***********886544444449*********************9999999999999997 PP
3	B3	44.1	3.7e-14	377	466	1	90
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 ff+ +++++++s+ l +p f+++h g+k+ k+ +++ rsW kli+ + + ++ +++G + F+++n Lk gD ++F+l++r e OWM83645.1 377 FFQMAMKKSYFSSQFLNIPAAFTRDHlGLKS---KEHMVTPkVGDRSWLTKLIVsNPSLSTAKFSAGFSAFAEENSLKPGDLCTFELIQRAEM 466 666677888888889*********76663...34455551666***9966666679***********************986444 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MAFRTPQMED GQSTSFDLKA PHFFKIILHS TIQSGKLVIP KKFVRKYGAE LSKSNVVRLK 60 VPSGDAWEVE LRREDGAVWL ENGWMDFVNF YSVKHGDFLV FWYKSRSSNE FDVVLFDKSA 120 TEIEYPLRSQ ATLSPIKVEE INDDEDHVIP SEMMEDLGSS SRITRRTSHL LTGNDSTDKN 180 YVPSKTLVGA KKVKALERAK MFKSSNPYFP VVMQPYYVHP PYELNVPGRF VQRYMDHKGS 240 SQLKLYVSGD KIWTVRCKSG VRRGQVKAKV LGRGWKAFVV DNGLVLGDVC VFESIRGLRS 300 ISFKVTIFRA PQPAKSCTVQ LQGEAAFSRQ EGGSGAKFEG KEKDSSLDMK QVQKNKKKNA 360 ICNEFQPACL FISEHPFFQM AMKKSYFSSQ FLNIPAAFTR DHLGLKSKEH MVTPKVGDRS 420 WLTKLIVSNP SLSTAKFSAG FSAFAEENSL KPGDLCTFEL IQRAEMVFRT SISRVKRKQN 480 N

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MAFRTPQMED GQSTSFDLKA PHFFKIILHS TIQSGKLVIP KKFVRKYGAE LSKSNVVRLK  60
VPSGDAWEVE LRREDGAVWL ENGWMDFVNF YSVKHGDFLV FWYKSRSSNE FDVVLFDKSA  120
TEIEYPLRSQ ATLSPIKVEE INDDEDHVIP SEMMEDLGSS SRITRRTSHL LTGNDSTDKN  180
YVPSKTLVGA KKVKALERAK MFKSSNPYFP VVMQPYYVHP PYELNVPGRF VQRYMDHKGS  240
SQLKLYVSGD KIWTVRCKSG VRRGQVKAKV LGRGWKAFVV DNGLVLGDVC VFESIRGLRS  300
ISFKVTIFRA PQPAKSCTVQ LQGEAAFSRQ EGGSGAKFEG KEKDSSLDMK QVQKNKKKNA  360
ICNEFQPACL FISEHPFFQM AMKKSYFSSQ FLNIPAAFTR DHLGLKSKEH MVTPKVGDRS  420
WLTKLIVSNP SLSTAKFSAG FSAFAEENSL KPGDLCTFEL IQRAEMVFRT SISRVKRKQN  480
N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-36	B3 family protein