PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM83714.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 322aa    MW: 35105.4 Da    PI: 7.6076
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM83714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.5e-13107150855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  Er RR+++++ f+ L  llP++     +K +K++++ +Av+YIksLq
  OWM83714.1 107 TERERRKKMRNMFASLHALLPQL----PPKADKSTVVDEAVNYIKSLQ 150
                 6*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MSEDQRDHDE GFFWESQSWG FSNSDNNSGN SEGIVKSNMN PSKAPGLSSN NNQTLAVEAK  60
AVAAPGQPSS AAPSKKRCRG GSAVPKNGEG KGGAGGEAGD HEIHIWTERE RRKKMRNMFA  120
SLHALLPQLP PKADKSTVVD EAVNYIKSLQ VTLQKLQKQK LERLHTATTF SYDPSLLTPI  180
QKLPYNSREA FLADQGSSSN INHGGSLPPS GPSSSNSSPL PRYPVVFQTW TSSNVVLNIC  240
GDSVHFNICS SRRPGVLAAI LCALEKYKIE VMSVHVSSDC HRSFYMIQAH VNMEAHDQLT  300
EVLTIEDVCR QAAGEIMLWT SP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-48bHLH family protein