PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83732.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 420aa MW: 47466.4 Da PI: 5.4481

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.2	1.1e-16	83	171	2	98
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +k +++s+v +l lpk f++ h +e + +++ledesg++ e k+ ++++ l++GW++F a+ L egD++vF+l++ ++f +v ++r OWM83732.1 83 VKPMVKSHVAGGFWLGLPKGFCTLHL--PEDDAKIILEDESGKEHETKY--LAYKSG--LSGGWRGFSIAHSLVEGDVLVFHLVEPTRF--KVYIVR 171 6899****************8883..345679***********..555555..9********************9876666..888877 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MGIAQDGEGK KQKPEKLLRR RRSEPPQRVR SKKVVVSCDE RMPKCEKRKR STVDGPFSVV 60 NTHVMDRAKE VQSCLQQEFP SLVKPMVKSH VAGGFWLGLP KGFCTLHLPE DDAKIILEDE 120 SGKEHETKYL AYKSGLSGGW RGFSIAHSLV EGDVLVFHLV EPTRFKVYIV RSRSFGEVDG 180 ALGLLGLDPC LKTMSSENDK KTCEEIEDDE YWEPLAYEIP LENGEDNEDP VPELLDGIRF 240 SQSVIDFKDV RSIEDFTIVV DRLVIDSEFS KNLRAKYYDL CCSQRSFLHE KLLEGLNCKL 300 AAGIISETMN IADAIRASRI TTSPEYFAVW EKTLKAFADL GMEVGFLQAR LELLTNLVGS 360 KRIKIARSEQ ASAEEEVSRL EAKIMEAKET ISKLDAEIKT LEKNKNGLEL MFHDLAMAPW

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MGIAQDGEGK KQKPEKLLRR RRSEPPQRVR SKKVVVSCDE RMPKCEKRKR STVDGPFSVV  60
NTHVMDRAKE VQSCLQQEFP SLVKPMVKSH VAGGFWLGLP KGFCTLHLPE DDAKIILEDE  120
SGKEHETKYL AYKSGLSGGW RGFSIAHSLV EGDVLVFHLV EPTRFKVYIV RSRSFGEVDG  180
ALGLLGLDPC LKTMSSENDK KTCEEIEDDE YWEPLAYEIP LENGEDNEDP VPELLDGIRF  240
SQSVIDFKDV RSIEDFTIVV DRLVIDSEFS KNLRAKYYDL CCSQRSFLHE KLLEGLNCKL  300
AAGIISETMN IADAIRASRI TTSPEYFAVW EKTLKAFADL GMEVGFLQAR LELLTNLVGS  360
KRIKIARSEQ ASAEEEVSRL EAKIMEAKET ISKLDAEIKT LEKNKNGLEL MFHDLAMAPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	19	49	RRRRSEPPQRVRSKKVVVSCDERMPKCEKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-41	B3 family protein