PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83890.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

DBB

Protein Properties

Length: 314aa MW: 35024.8 Da PI: 6.8106

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.7	2.3e-08	4	42	5	37
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C+ +e++e++lfC ++ lC+ C H H OWM83890.1 4 QCDVCEKEEATLFCSADEAVLCDGCDRRVHWTnklaskH 42 7*************************9999654555555 PP
2	zf-B_box	28.2	3.9e-09	55	92	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++e ++ lfC++++ lC++C +H+ Ht OWM83890.1 55 SPLCDICQERRALLFCQEDRAILCRECDIPIHRAneHT 92 689*****************************768875 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MKIQCDVCEK EEATLFCSAD EAVLCDGCDR RVHWTNKLAS KHNRYSLLHP TFKDSPLCDI 60 CQERRALLFC QEDRAILCRE CDIPIHRANE HTQKHSRFLL AGVKLSPSTS PAAHYPQPLL 120 PSSSATTSTG LCRQESSSPQ GSGFVNPTFE VGSSGGTGAG REEENQMMVS DGGSMSTSSI 180 SEYLMETLPG WRVDEFLDCS HHLSHHHAHH HHNNNNNSSS SNGYCKTFDR KLPMPDYDFG 240 SDTSSSSPAP RDIPIPVPQF FAQPHHKCPP QDQTSFFDGV REPENARSTR SSRKRRNGFF 300 NEALFSQGVH TFVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	4e-63	DBB family protein