PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83906.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

DBB

Protein Properties

Length: 212aa MW: 23633.7 Da PI: 6.2984

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23	1.6e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H OWM83906.1 4 LCDVCESAAAILFCAADEAALCRACDEKVH 33 7**************************998 PP
2	zf-B_box	26.9	1e-08	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + + C+ +e+ ++ ++Ce +++ lC +C + H g H OWM83906.1 52 DVPHCDICENAPAFFYCEVDGTSLCLQCDMIVHVGgkrtH 91 5689**************************9995544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCRACDE KVHLCNKLAN RHVRVGLADP SDVPHCDICE 60 NAPAFFYCEV DGTSLCLQCD MIVHVGGKRT HGRYLLLRQR IEFPGDKPSR LEETGLQTLD 120 QNDLKREQNQ LPELKTRESQ QNHRVSPIQE SETGAPADGT MGNKLIDLNS RPRRIHGQTS 180 TNQKQDMDIV NGLNHESVSI VPVGSFKREP EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-87	DBB family protein